C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel flower domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114006 Cacfd1-001 ENSMUSG00000015488 10090 + 2:27009926-27021089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungPlacentaENSMUST00000114006
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Placenta
ENSMUST00000114006 9.807±0.54 39.363±3.67 7.437±1.88 15.703±1.52 6.307±0.14 10.776±2.84 7.775±2.08 10.140±0.00 4.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DA CIL_0006DA_0002 CGP 2:26973416-27021089
CIL_0006D9 CIL_0006D9_0002 CGP 2:27009926-27027998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005262 IEA calcium channel activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0030285 IEA integral component of synaptic vesicle membrane
GO:0048488 IEA synaptic vesicle endocytosis
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316948 CACFD1-001 protein_coding Homo_sapiens 0 580
ENST00000444798 CACFD1-005 protein_coding Homo_sapiens 0 392
ENST00000474734 CACFD1-003 processed_transcript Homo_sapiens 0 372
ENST00000489519 CACFD1-004 processed_transcript Homo_sapiens 0 348
ENST00000540581 CACFD1-201 protein_coding Homo_sapiens 0 479

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