C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 554
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317243 ZNF554-001 ENSG00000172006 9606 + 19:2819874-2835773 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartLiverMuscleOvaryPlacentaTestisENST00000317243
Transcript ID Adrenal Bladder Brain Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000317243 0.696±0.00 0.292±0.00 0.880±0.02 0.513±0.00 0.255±0.00 0.715±0.21 0.291±0.00 0.322±0.05 0.989±0.19 1.008±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 5e-25 121
ENSDART00000106246 CABZ01006835.1-201 protein_coding Danio_rerio 0.0000003 62
ENSDART00000133285 si:dkey-15h8.16-005 retained_intron Danio_rerio 0.0000003 62
ENSDART00000144888 si:dkey-15h8.16-003 processed_transcript Danio_rerio 0.0000003 62
ENSDART00000139025 si:dkey-15h8.16-006 processed_transcript Danio_rerio 0.0000003 62
ENSDART00000133211 si:dkey-15h8.16-001 protein_coding Danio_rerio 0.0000003 62
ENSDART00000153884 si:ch73-144d13.5-001 protein_coding Danio_rerio 0.0002 53

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