C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein C-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317869 HNRNPCL1-001 ENSG00000179172 9606 - 1:12847408-12848725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonTestisENST00000317869
Transcript ID Adrenal Brain Colon Testis
ENST00000317869 0.028±0.00 0.029±0.00 0.026±0.00 0.013±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117947 Gm12445-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000174284 Gm18889-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000164655 Hnrnpc-202 protein_coding Mus_musculus 0 573
ENSMUST00000111610 Hnrnpc-201 protein_coding Mus_musculus 0 573

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