C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosidase, alpha; neutral C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318010 GANC-001 ENSG00000214013 9606 + 15:42274242-42356935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonLiverLungOvaryENST00000318010
Transcript ID Adrenal Bladder Breast Colon Liver Lung Ovary
ENST00000318010 1.608±0.00 1.246±0.00 1.871±0.00 1.770±0.00 1.117±0.06 2.904±1.24 1.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PM CIL_0005PM_0001 CGP 15:42158701-42273663
CIL_0005PL CIL_0005PL_0001 CGP 15:42210452-42356935
CIL_0004QL CIL_0004QL_0002 CGP 15:42273233-42412318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004558 NAS alpha-1,4-glucosidase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0030246 IEA carbohydrate binding
GO:0032450 IEA maltose alpha-glucosidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135074 Ganc-001 protein_coding Mus_musculus 0 2904
ENSMUST00000043755 Ganc-003 processed_transcript Mus_musculus 0 2863
ENSMUST00000152437 Ganc-002 processed_transcript Mus_musculus 0 2619
ENSMUST00000136993 Ganc-004 processed_transcript Mus_musculus 0 2460
ENSMUST00000132835 Ganc-007 retained_intron Mus_musculus 0 1463
ENSMUST00000131523 Ganc-010 processed_transcript Mus_musculus 0 586
ENSMUST00000145134 Ganc-013 processed_transcript Mus_musculus 0 549

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