C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EPS8-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318562 EPS8L2-001 ENSG00000177106 9606 + 11:706113-727727 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000318562
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000318562 4.072±0.00 4.528±2.51 4.478±1.94 30.487±0.00 19.333±0.00 18.043±0.00 10.041±5.70 30.488±7.28 5.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OP CIL_0003OP_0001 CGP 11:637293-706715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005089 IDA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007266 IDA Rho protein signal transduction
GO:0030676 IDA Rac guanyl-nucleotide exchange factor activity
GO:0031982 IDA vesicle
GO:0032321 IDA positive regulation of Rho GTPase activity
GO:0032587 IDA ruffle membrane
GO:0032855 IDA positive regulation of Rac GTPase activity
GO:0035023 IDA regulation of Rho protein signal transduction
GO:0043234 IDA protein complex
GO:0070062 IDA extracellular vesicular exosome
GO:1900029 IGI positive regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026577 Eps8l2-001 protein_coding Mus_musculus 0 1999
ENSMUST00000140025 Eps8l2-002 retained_intron Mus_musculus 0 1068
ENSMUST00000136736 Eps8l2-004 retained_intron Mus_musculus 0 496
ENSMUST00000146042 Eps8l2-005 retained_intron Mus_musculus 0 483
ENSMUST00000133669 Eps8l2-007 processed_transcript Mus_musculus 0 475
ENSMUST00000155729 Eps8l2-009 processed_transcript Mus_musculus 0 383
ENSMUST00000145108 Eps8l2-006 processed_transcript Mus_musculus 0 351
ENSMUST00000127501 Eps8l2-010 retained_intron Mus_musculus 0 333
ENSMUST00000136240 Eps8l2-008 processed_transcript Mus_musculus 0 309
ENSMUST00000143633 Eps8l2-003 protein_coding Mus_musculus 8.99634e-43 180

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