C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: forkhead box P1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318779 FOXP1-014 ENSG00000114861 9606 - 3:71197882-71583939 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L4 CIL_0007L4_0001 UCNEbase 3:70042617-71525233
CIL_0009A7 CIL_0009A7_0001 VISTA 3:70522165-71123806
CIL_0008N6 CIL_0008N6_0001 VISTA 3:70677078-71277613
CIL_00096K CIL_00096K_0001 VISTA 3:70685238-71286279
CIL_0007PZ CIL_0007PZ_0001 VISTA 3:70703225-71304095
CIL_0008OZ CIL_0008OZ_0001 VISTA 3:70750006-71351700
CIL_00086J CIL_00086J_0001 VISTA 3:70804405-71405902
CIL_000840 CIL_000840_0001 VISTA 3:70837240-71439432
CIL_0007XT CIL_0007XT_0001 VISTA 3:70904519-71505862
CIL_0007SI CIL_0007SI_0001 VISTA 3:70928161-71529805
CIL_0008LZ CIL_0008LZ_0001 VISTA 3:70941267-71543433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176565 Foxp1-014 protein_coding Mus_musculus 0 459
ENSMUST00000113322 Foxp1-201 protein_coding Mus_musculus 0 449
ENSMUST00000176632 Foxp1-026 protein_coding Mus_musculus 0 449
ENSMUST00000176850 Foxp1-027 protein_coding Mus_musculus 0 449
ENSMUST00000177227 Foxp1-033 protein_coding Mus_musculus 0 405
ENSMUST00000177235 Foxp1-017 processed_transcript Mus_musculus 0 303
ENSMUST00000155466 Gm20696-001 nonsense_mediated_decay Mus_musculus 0 303
ENSMUST00000131967 Foxp1-003 retained_intron Mus_musculus 0 239
ENSMUST00000075832 Foxp1-005 processed_transcript Mus_musculus 0 239
ENSMUST00000113326 Foxp1-004 protein_coding Mus_musculus 0 239
ENSMUST00000138754 Foxp1-002 retained_intron Mus_musculus 0 211
ENSMUST00000177208 Foxp1-030 protein_coding Mus_musculus 0 211

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