C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | predicted gene 20696 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155466  |
Gm20696-001 |
ENSMUSG00000030068 |
10090 | - |
6:99257484-99666797  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007L4 | CIL_0007L4_0002 | UCNEbase | 6:98080124-99467654 |
| CIL_00032Q | CIL_00032Q_0002 | CGP | 6:98238014-99522721 |
| CIL_0007PZ | CIL_0007PZ_0002 | VISTA | 6:98668191-99269077 |
| CIL_0008OZ | CIL_0008OZ_0002 | VISTA | 6:98712965-99314601 |
| CIL_00086J | CIL_00086J_0002 | VISTA | 6:98766719-99368664 |
| CIL_000840 | CIL_000840_0002 | VISTA | 6:98803307-99405363 |
| CIL_0007XT | CIL_0007XT_0002 | VISTA | 6:98869018-99470092 |
| CIL_0007SI | CIL_0007SI_0002 | VISTA | 6:98889657-99491464 |
| CIL_0008LZ | CIL_0008LZ_0002 | VISTA | 6:98901230-99503437 |
| CIL_00089M | CIL_00089M_0002 | VISTA | 6:98951427-99552239 |
| CIL_0008X1 | CIL_0008X1_0002 | VISTA | 6:99046432-99648661 |
| CIL_0008ML | CIL_0008ML_0002 | VISTA | 6:99094912-99696384 |
| CIL_0008XU | CIL_0008XU_0002 | VISTA | 6:99103919-99705378 |
| CIL_0008EM | CIL_0008EM_0002 | VISTA | 6:99166876-99767819 |
| CIL_0007YY | CIL_0007YY_0002 | VISTA | 6:99183861-99786227 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003743 | IEA | translation initiation factor activity |
| GO:0005737 | IEA | cytoplasm |
| GO:0006413 | IEA | translational initiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000140745
|
eif4e3-002 | protein_coding | Danio_rerio | 0.00000000005 | 75 |
|
ENSDART00000013768
|
eif4e3-001 | protein_coding | Danio_rerio | 0.00000000005 | 75 |
|
ENST00000318779
|
FOXP1-014 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000318789
|
FOXP1-001 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000327590
|
FOXP1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 215 |
|
ENST00000475937
|
FOXP1-004 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000493010
|
FOXP1-017 | processed_transcript | Homo_sapiens | 6e-23 | 111 |
|
ENST00000493089
|
FOXP1-002 | protein_coding | Homo_sapiens | 0 | 303 |
|
ENST00000615603
|
FOXP1-202 | protein_coding | Homo_sapiens | 0 | 303 |
