C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box P1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114861 FOXP1 9606 - 3:70954693-71583989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318779 FOXP1-014 71197882-71583939 protein_coding
  ENST00000318789 FOXP1-001 70954693-71583989 protein_coding
  ENST00000327590 FOXP1-003 70959191-71493555 nonsense_mediated_decay
  ENST00000460805 FOXP1-022 70959191-70966352 retained_intron
  ENST00000468577 FOXP1-012 70959247-71198381 protein_coding
  ENST00000470112 FOXP1-018 71296085-71306015 processed_transcript
  ENST00000471386 FOXP1-016 71493426-71583739 processed_transcript
  ENST00000472382 FOXP1-020 71040278-71053773 protein_coding
  ENST00000475937 FOXP1-004 70956745-71543557 protein_coding
  ENST00000484350 FOXP1-005 70959211-71304760 protein_coding
  ENST00000485326 FOXP1-021 71015549-71064926 protein_coding
  ENST00000491238 FOXP1-011 70959191-71130837 protein_coding
  ENST00000493010 FOXP1-017 71299835-71360760 processed_transcript
  ENST00000493089 FOXP1-002 70959204-71583753 protein_coding
  ENST00000497355 FOXP1-009 70959191-71130593 protein_coding
  ENST00000497553 FOXP1-019 71046937-71065767 protein_coding
  ENST00000498154 FOXP1-015 71493426-71581953 processed_transcript
  ENST00000498215 FOXP1-006 70959204-71245165 protein_coding
  ENST00000610810 FOXP1-023 71053703-71306029 protein_coding
  ENST00000614176 FOXP1-201 70954715-71064923 protein_coding
  ENST00000614183 FOXP1-025 70968848-70978029 processed_transcript
  ENST00000615603 FOXP1-202 70954715-71583989 protein_coding
  ENST00000622151 FOXP1-024 71197882-71210869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318789ENST00000460805ENST00000468577ENST00000475937ENST00000485326ENST00000491238ENST00000493089ENST00000497355ENST00000614176ENST00000614183ENST00000615603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318789 N/A N/A N/A N/A 1.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460805 N/A N/A N/A N/A N/A 26.926±0.00 N/A N/A N/A N/A 3.180±0.00 N/A N/A N/A
ENST00000468577 N/A N/A N/A 4.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475937 6.144±0.00 N/A 0.993±0.00 N/A 2.687±0.00 5.073±1.71 1.142±0.33 N/A 3.603±0.00 N/A 0.950±0.60 4.878±2.64 1.519±0.91 3.011±0.26
ENST00000485326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.909±0.00 N/A N/A N/A
ENST00000491238 N/A N/A 2.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.572±0.00 N/A N/A
ENST00000493089 N/A N/A 1.458±0.00 3.169±0.00 4.196±0.00 N/A N/A 3.199±0.00 6.627±0.00 8.743±0.00 0.460±0.00 3.854±0.00 N/A N/A
ENST00000497355 N/A N/A 1.906±0.00 N/A 5.600±0.00 12.077±0.00 2.865±0.00 N/A 13.043±0.00 13.351±0.00 4.988±0.00 8.468±1.41 6.362±0.00 8.380±0.00
ENST00000614176 9.601±0.00 10.868±0.00 N/A 9.503±0.00 5.112±3.98 8.833±5.84 1.989±0.00 2.517±0.00 1.177±0.00 15.705±0.00 4.438±0.00 6.288±2.12 2.045±1.24 6.391±0.00
ENST00000614183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.859±0.00 21.176±0.00 13.512±0.00
ENST00000615603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L4 CIL_0007L4_0001 UCNEbase 3:70042617-71525233
CIL_0009A7 CIL_0009A7_0001 VISTA 3:70522165-71123806
CIL_0008N6 CIL_0008N6_0001 VISTA 3:70677078-71277613
CIL_00096K CIL_00096K_0001 VISTA 3:70685238-71286279
CIL_0007PZ CIL_0007PZ_0001 VISTA 3:70703225-71304095
CIL_0008OZ CIL_0008OZ_0001 VISTA 3:70750006-71351700
CIL_00086J CIL_00086J_0001 VISTA 3:70804405-71405902
CIL_000840 CIL_000840_0001 VISTA 3:70837240-71439432
CIL_0007XT CIL_0007XT_0001 VISTA 3:70904519-71505862
CIL_0007SI CIL_0007SI_0001 VISTA 3:70928161-71529805
CIL_0008LZ CIL_0008LZ_0001 VISTA 3:70941267-71543433

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001701 IEA in utero embryonic development
GO:0002053 IEA positive regulation of mesenchymal cell proliferation
GO:0002329 IEA pre-B cell differentiation
GO:0002639 IEA positive regulation of immunoglobulin production
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007507 IEA heart development
GO:0007519 IEA skeletal muscle tissue development
GO:0008045 IEA motor neuron axon guidance
GO:0021517 IEA ventral spinal cord development
GO:0030324 IEA lung development
GO:0033152 IEA immunoglobulin V(D)J recombination
GO:0042803 IEA protein homodimerization activity
GO:0043565 IEA sequence-specific DNA binding
GO:0045214 IEA sarcomere organization
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity
GO:0048745 IEA smooth muscle tissue development
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0055007 IEA cardiac muscle cell differentiation
GO:0060043 IEA regulation of cardiac muscle cell proliferation
GO:0061140 IEA lung secretory cell differentiation
GO:0072358 IEA cardiovascular system development
GO:1901249 IEA regulation of lung goblet cell differentiation
GO:1901250 IEA negative regulation of lung goblet cell differentiation
GO:2000727 IEA positive regulation of cardiac muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014181 foxp1b forkhead box P1b protein_coding Danio_rerio
ENSMUSG00000030067 Foxp1 forkhead box P1 protein_coding Mus_musculus

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