C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318803 ST6GALNAC5-002 ENSG00000117069 9606 + 1:76867480-77064058 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000318803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000318803 0.091±0.00 0.172±0.00 0.281±0.00 4.672±0.51 0.430±0.27 0.647±0.00 0.085±0.00 0.230±0.00 0.641±0.63 1.620±0.26 1.209±0.82 0.447±0.17 1.087±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008373 IEA sialyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044278 St6galnac5-001 protein_coding Mus_musculus 0 1400
ENSDART00000057299 st6galnac5a-201 protein_coding Danio_rerio 0 394
ENSDART00000133092 st6galnac5a-001 protein_coding Danio_rerio 0 394
ENSMUST00000161757 St6galnac5-002 processed_transcript Mus_musculus 0 302

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