C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxiredoxin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319248 PRDX1-001 ENSG00000117450 9606 - 1:45511047-45521956 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319248 94.544±0.00 201.702±0.00 57.945±0.00 140.473±16.02 76.647±3.97 93.790±18.81 83.898±44.04 221.116±70.59 174.265±110.42 126.386±52.55 123.687±57.77 139.512±56.90 189.678±117.46 69.909±34.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0001895 IEP retina homeostasis
GO:0004601 IDA peroxidase activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0008379 IDA thioredoxin peroxidase activity
GO:0016209 IEA antioxidant activity
GO:0016491 IEA oxidoreductase activity
GO:0042744 IDA hydrogen peroxide catabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0051920 IEA peroxiredoxin activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135573 Prdx1-001 protein_coding Mus_musculus 0 843
ENSMUST00000106470 Prdx1-003 protein_coding Mus_musculus 0 826
ENSMUST00000180210 Gm21399-201 processed_pseudogene Mus_musculus 0 793
ENSMUST00000062591 Gm7204-201 processed_pseudogene Mus_musculus 0 765
ENSMUST00000030454 Prdx1-006 protein_coding Mus_musculus 0 713
ENSMUST00000151129 Prdx1-004 protein_coding Mus_musculus 0 686
ENSMUST00000159103 Gm15974-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000129315 Prdx1-002 protein_coding Mus_musculus 0 527

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