C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxiredoxin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135573 Prdx1-001 ENSMUSG00000028691 10090 + 4:116685544-116700822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135573 68.853±14.17 23.118±4.15 67.488±3.48 15.637±11.87 46.904±8.04 36.515±5.52 38.120±9.11 125.642±12.31 129.359±35.13 42.893±2.28 30.549±6.96 50.405±17.57 38.868±32.11 10.677±5.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000302 IMP response to reactive oxygen species
GO:0001895 IEA retina homeostasis
GO:0004601 IEA peroxidase activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005719 IEA nuclear euchromatin
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0005782 IEA peroxisomal matrix
GO:0005829 IEA cytosol
GO:0006979 IMP response to oxidative stress
GO:0008283 IMP cell proliferation
GO:0008379 IEA thioredoxin peroxidase activity
GO:0019430 IMP removal of superoxide radicals
GO:0020037 IEA heme binding
GO:0032872 IMP regulation of stress-activated MAPK cascade
GO:0034101 IMP erythrocyte homeostasis
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0042345 IMP regulation of NF-kappaB import into nucleus
GO:0042744 IEA hydrogen peroxide catabolic process
GO:0042802 IPI identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0044822 IEA poly(A) RNA binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262746 PRDX1-201 protein_coding Homo_sapiens 0 839
ENST00000319248 PRDX1-001 protein_coding Homo_sapiens 0 843
ENST00000372079 PRDX1-003 protein_coding Homo_sapiens 0 329
ENST00000401061 MMACHC-001 protein_coding Homo_sapiens 9e-35 154
ENST00000424390 PRDX1-004 protein_coding Homo_sapiens 0 689
ENST00000447184 PRDX1-002 protein_coding Homo_sapiens 0 691
ENST00000449329 TDPX2-001 processed_pseudogene Homo_sapiens 0 640
ENST00000483583 PRDX1-005 processed_transcript Homo_sapiens 0 387

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