C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor RNA polymerase II-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319359 ELL3-001 ENSG00000128886 9606 - 15:43772600-43777543 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0001 VISTA 15:43579049-44181693
CIL_00067X CIL_00067X_0001 CGP 15:43746392-43777543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006354 IDA DNA-templated transcription, elongation
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0006368 IDA:IEA transcription elongation from RNA polymerase II promoter
GO:0007283 NAS spermatogenesis
GO:0008023 NAS:IEA transcription elongation factor complex
GO:0010717 ISS regulation of epithelial to mesenchymal transition
GO:0032786 IDA positive regulation of DNA-templated transcription, elongation
GO:0035326 ISS enhancer binding
GO:0042795 IMP snRNA transcription from RNA polymerase II promoter
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048863 ISS stem cell differentiation
GO:0050769 IEA positive regulation of neurogenesis
GO:1901797 IEA negative regulation of signal transduction by p53 class mediator
GO:1902166 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000179 IEA positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116432 Ell3-201 protein_coding Mus_musculus 0 968
ENSMUST00000028679 Ell3-001 protein_coding Mus_musculus 0 968
ENSMUST00000140752 Serinc4-005 nonsense_mediated_decay Mus_musculus 0 874

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