C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine incorporator 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140752 Serinc4-005 ENSMUSG00000046110 10090 - 2:121439059-121455837 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600
CIL_00067X CIL_00067X_0002 CGP 2:121413775-121444278

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299969 SERINC4-004 protein_coding Homo_sapiens 0 307
ENST00000300289 PDIA3-001 protein_coding Homo_sapiens 3e-33 148
ENST00000319327 SERINC4-001 protein_coding Homo_sapiens 0 575
ENST00000319359 ELL3-001 protein_coding Homo_sapiens 0 874
ENST00000406925 HYPK-007 protein_coding Homo_sapiens 3e-29 135
ENST00000412697 SERINC4-005 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000417761 RP11-296A16.1-001 nonsense_mediated_decay Homo_sapiens 0 1755
ENST00000445816 SERF2-003 nonsense_mediated_decay Homo_sapiens 5.04467e-44 183
ENST00000448553 SERINC4-002 nonsense_mediated_decay Homo_sapiens 0 577
ENST00000457418 SERINC4-003 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000467869 ELL3-003 retained_intron Homo_sapiens 0 819
ENST00000476490 SERINC4-006 retained_intron Homo_sapiens 5e-30 135
ENST00000497465 ELL3-005 processed_transcript Homo_sapiens 0 544
ENST00000620261 HYPK-201 protein_coding Homo_sapiens 3e-29 135

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