C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319595 HTR1F-001 ENSG00000179097 9606 + 3:87990696-87993835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319595 0.114±0.00 0.073±0.00 0.149±0.00 0.746±0.48 0.160±0.12 0.116±0.04 0.094±0.01 0.135±0.00 0.125±0.00 0.304±0.25 0.033±0.00 0.043±0.03 0.162±0.04 0.118±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022L CIL_00022L_0002 CGP 3:87259404-87993835

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004993 IMP serotonin receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 IMP integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007187 TAS G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007193 IMP adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007210 IEA serotonin receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0016021 IEA integral component of membrane
GO:0051378 IDA serotonin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063076 Htr1f-201 protein_coding Mus_musculus 0 1387

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