C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-acylglycerol-3-phosphate O-acyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320285 AGPAT4-001 ENSG00000026652 9606 - 6:161130025-161274061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320285
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320285 0.387±0.00 0.216±0.00 2.911±0.40 0.735±0.00 0.581±0.30 0.305±0.09 0.814±0.00 0.139±0.00 0.650±0.05 0.096±0.00 0.746±0.37 2.154±0.93 0.462±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y5 CIL_0007Y5_0001 VISTA 6:160860643-161462319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003841 NAS 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008654 NAS phospholipid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019432 TAS triglyceride biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024594 Agpat4-001 protein_coding Mus_musculus 0 1186
ENSMUST00000170858 Agpat4-006 nonsense_mediated_decay Mus_musculus 0 791
ENSMUST00000167905 Agpat4-005 retained_intron Mus_musculus 0 401

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