C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratinocyte differentiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320567 KDF1-001 ENSG00000175707 9606 - 1:26949562-26960406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000320567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000320567 0.050±0.00 0.355±0.00 1.022±0.00 0.548±0.00 1.282±0.69 1.624±0.50 2.750±2.19 0.384±0.00 1.090±0.39 3.751±4.17 6.307±1.08 1.759±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414
CIL_0003PZ CIL_0003PZ_0002 CGP 1:26911489-26960406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003334 IEA keratinocyte development
GO:0005737 ISS cytoplasm
GO:0005938 IEA cell cortex
GO:0010482 ISS regulation of epidermal cell division
GO:0010839 IEA negative regulation of keratinocyte proliferation
GO:0016331 ISS morphogenesis of embryonic epithelium
GO:0030054 ISS cell junction
GO:0031252 IEA cell leading edge
GO:0045606 ISS positive regulation of epidermal cell differentiation
GO:0048589 ISS developmental growth
GO:0060887 ISS limb epidermis development
GO:0061436 ISS establishment of skin barrier
GO:2000647 ISS negative regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105901 Kdf1-002 protein_coding Mus_musculus 0 1443
ENSMUST00000042919 Kdf1-001 protein_coding Mus_musculus 0 1387
ENSMUST00000121797 Kdf1-005 protein_coding Mus_musculus 0 1245
ENSMUST00000149807 Kdf1-003 protein_coding Mus_musculus 0 880

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