C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratinocyte differentiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042919 Kdf1-001 ENSMUSG00000037600 10090 + 4:133518992-133530790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000042919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000042919 0.759±0.00 0.811±0.42 0.931±0.04 0.139±0.00 0.995±0.53 6.432±1.60 6.333±1.99 0.667±0.44 1.685±0.25 0.803±0.39 5.221±3.64 0.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003334 IGI keratinocyte development
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005938 IDA cell cortex
GO:0010482 IMP regulation of epidermal cell division
GO:0010839 IGI negative regulation of keratinocyte proliferation
GO:0016331 IMP morphogenesis of embryonic epithelium
GO:0030054 IDA cell junction
GO:0031252 IDA cell leading edge
GO:0045606 IMP positive regulation of epidermal cell differentiation
GO:0048589 IMP developmental growth
GO:0060887 IMP limb epidermis development
GO:0061436 IMP establishment of skin barrier
GO:2000647 IMP negative regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320567 KDF1-001 protein_coding Homo_sapiens 0 1387
ENST00000616918 KDF1-201 protein_coding Homo_sapiens 0 1029

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