C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320785 KIF1C-001 ENSG00000129250 9606 + 17:4997948-5028401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320785 39.103±0.00 23.572±0.00 3.814±0.00 8.341±5.35 21.334±17.30 21.031±14.92 35.924±18.76 14.528±8.74 11.662±5.56 10.932±7.35 63.236±45.32 17.330±9.46 12.841±2.75 20.765±5.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020Y CIL_00020Y_0001 CGP 17:4988130-5028401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 TAS motor activity
GO:0003777 IEA microtubule motor activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005783 TAS endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005871 IEA:IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0007018 IEA:IBA microtubule-based movement
GO:0008017 IEA microtubule binding
GO:0008152 IEA:IBA metabolic process
GO:0008219 IEA cell death
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016192 IBA vesicle-mediated transport
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102554 Kif1c-001 protein_coding Mus_musculus 0 4643
ENSMUST00000137119 Kif1c-005 protein_coding Mus_musculus 0 4591
ENSMUST00000094499 Kif1c-002 protein_coding Mus_musculus 0 4578
ENSMUST00000072187 Kif1c-004 protein_coding Mus_musculus 0 2580
ENSMUST00000152618 Kif1c-003 protein_coding Mus_musculus 0 1773
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000009 62

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