C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102554 Kif1c-001 ENSMUSG00000020821 10090 + 11:70700548-70731964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENSMUST00000102554
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENSMUST00000102554 7.349±0.00 3.777±0.26 0.806±0.00 7.546±0.00 9.509±1.09 11.349±0.00 4.543±0.22 8.641±1.29 22.185±0.23 4.180±0.67 0.437±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020Y CIL_00020Y_0002 CGP 11:70688361-70731964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0006890 IDA retrograde vesicle-mediated transport, Golgi to ER
GO:0007018 IBA microtubule-based movement
GO:0008017 IEA microtubule binding
GO:0008152 IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016887 IBA ATPase activity
GO:0030705 IBA cytoskeleton-dependent intracellular transport
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050915 kif1b-201 protein_coding Danio_rerio 0 412
ENSDART00000053807 kif1b-202 protein_coding Danio_rerio 0 412
ENSDART00000146458 kif1b-001 protein_coding Danio_rerio 0 412
ENSDART00000141075 kif1b-002 protein_coding Danio_rerio 0 412
ENSDART00000139196 kif1ab-001 protein_coding Danio_rerio 0 359
ENSDART00000089012 kif1ab-201 protein_coding Danio_rerio 0 309
ENST00000320389 KIF1A-001 protein_coding Homo_sapiens 0 322
ENST00000320785 KIF1C-001 protein_coding Homo_sapiens 0 4643
ENST00000404283 KIF1A-008 protein_coding Homo_sapiens 0 322
ENST00000463388 KIF1A-009 retained_intron Homo_sapiens 0.00000000000003 82
ENST00000498729 KIF1A-201 protein_coding Homo_sapiens 0 322
ENST00000573815 KIF1C-004 processed_transcript Homo_sapiens 0 797
ENST00000574165 KIF1C-002 protein_coding Homo_sapiens 0 750

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