C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CREB regulated transcription coactivator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321949 CRTC1-002 ENSG00000105662 9606 + 19:18683677-18777952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000321949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000321949 8.442±0.00 4.438±0.00 1.505±0.00 5.322±3.08 1.709±1.09 2.003±1.33 1.414±1.11 2.524±1.73 1.212±0.67 6.754±0.00 6.717±6.87 3.597±2.69 6.824±4.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NM CIL_0004NM_0002 CGP 19:18636965-18782333
CIL_0004NL CIL_0004NL_0002 CGP 19:18683677-18791314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0008140 IDA cAMP response element binding protein binding
GO:0016032 IEA viral process
GO:0032793 ISS positive regulation of CREB transcription factor activity
GO:0043153 ISS entrainment of circadian clock by photoperiod
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051289 IEA protein homotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076615 Crtc1-001 protein_coding Mus_musculus 0 2030
ENSMUST00000142769 Crtc1-005 retained_intron Mus_musculus 0 1026
ENSMUST00000125613 Crtc1-004 retained_intron Mus_musculus 0 580
ENSMUST00000125273 Crtc1-002 retained_intron Mus_musculus 0 448
ENSDART00000113356 crtc1a-201 protein_coding Danio_rerio 0 191

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