C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galanin receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329003 GALR2-001 ENSG00000182687 9606 + 17:76074794-76077541 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryTestisENST00000329003
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Testis
ENST00000329003 0.032±0.00 0.139±0.00 0.143±0.00 0.164±0.00 2.187±2.09 0.140±0.00 0.039±0.00 0.221±0.14 0.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_0001IO CIL_0001IO_0001 CGP 17:76074794-76121576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004966 IDA galanin receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006936 TAS muscle contraction
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007188 TAS adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007194 IEA negative regulation of adenylate cyclase activity
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007218 IEA neuropeptide signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007275 TAS multicellular organismal development
GO:0007586 TAS digestion
GO:0007611 TAS learning or memory
GO:0007631 TAS feeding behavior
GO:0016021 IEA integral component of membrane
GO:0017046 IDA peptide hormone binding
GO:0031175 IEA neuron projection development
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:1902608 IMP positive regulation of large conductance calcium-activated potassium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055872 Galr2-001 protein_coding Mus_musculus 0 1170
ENSMUST00000154277 Galr2-002 processed_transcript Mus_musculus 0 708
ENSMUST00000058004 Gcat-202 protein_coding Mus_musculus 0 252
ENSMUST00000171999 Gcat-203 protein_coding Mus_musculus 5e-37 159

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