C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spinster homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329078 SPNS2-001 ENSG00000183018 9606 + 17:4498838-4539035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000329078
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000329078 7.120±0.00 24.195±0.00 6.620±3.91 3.331±2.53 5.234±0.00 5.194±0.00 26.639±0.00 2.879±0.00 19.268±18.65 5.428±0.00 6.810±1.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001782 IEA B cell homeostasis
GO:0002260 IEA lymphocyte homeostasis
GO:0002920 IEA regulation of humoral immune response
GO:0003376 IEA sphingosine-1-phosphate signaling pathway
GO:0006665 IEA sphingolipid metabolic process
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0043029 IEA T cell homeostasis
GO:0046624 IEA sphingolipid transporter activity
GO:0048073 IEA regulation of eye pigmentation
GO:0048535 IEA lymph node development
GO:0055085 IEA transmembrane transport
GO:0060348 IEA bone development
GO:0072676 IEA lymphocyte migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045303 Spns2-001 protein_coding Mus_musculus 0 2233
ENSMUST00000150491 Spns2-004 processed_transcript Mus_musculus 0 455
ENSMUST00000129274 Spns2-002 retained_intron Mus_musculus 0 444
ENSMUST00000144940 Spns2-005 protein_coding Mus_musculus 0 374
ENSMUST00000147418 Spns2-006 processed_transcript Mus_musculus 0 313
ENSMUST00000152894 Mybbp1a-002 retained_intron Mus_musculus 0 202
ENSMUST00000045633 Mybbp1a-001 protein_coding Mus_musculus 0 202

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