C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329251 EEF1G-001 ENSG00000254772 9606 - 11:62559601-62573973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329251 913.828±0.00 1176.620±0.00 63.597±0.00 177.013±107.77 506.980±356.88 615.503±462.46 200.676±138.38 363.323±237.20 254.816±92.16 515.296±420.16 650.559±334.73 1075.597±701.16 1005.134±350.78 503.284±205.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006414 TAS:IEA translational elongation
GO:0009615 IEP response to virus
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052248 Eef1g-001 protein_coding Mus_musculus 0 2052
ENSMUST00000190438 RP23-313K8.2-001 processed_pseudogene Mus_musculus 0 1703
ENSMUST00000135025 Eef1g-005 retained_intron Mus_musculus 0 1201
ENSMUST00000122932 Eef1g-002 processed_transcript Mus_musculus 0 811
ENSMUST00000120231 Gm12461-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000152076 Eef1g-004 retained_intron Mus_musculus 0 702
ENSMUST00000128626 Eef1g-006 processed_transcript Mus_musculus 0 701
ENSMUST00000166453 Gm4462-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000184002 Gm19015-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000184828 Gm19014-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000183895 Gm19013-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000127480 Eef1g-003 retained_intron Mus_musculus 0 363

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