C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mRNA turnover 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330263 MRTO4-001 ENSG00000053372 9606 + 1:19251539-19260128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330263
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330263 7.791±0.00 22.810±0.00 1.098±0.00 11.579±0.00 6.032±3.67 5.341±2.82 3.435±0.00 10.415±0.00 2.920±1.33 4.077±2.61 3.661±1.46 12.745±4.91 13.146±2.98 10.050±1.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0031965 IDA nuclear membrane
GO:0042254 IEA ribosome biogenesis
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102503 Mrto4-001 protein_coding Mus_musculus 0 1005
ENSMUST00000030513 Mrto4-002 protein_coding Mus_musculus 0 896
ENSMUST00000164169 Gm5633-201 processed_pseudogene Mus_musculus 0 706
ENSMUST00000131052 Mrto4-005 processed_transcript Mus_musculus 0 614
ENSMUST00000139749 Mrto4-006 retained_intron Mus_musculus 0 534
ENSMUST00000155257 Mrto4-004 protein_coding Mus_musculus 0 368
ENSMUST00000128239 Mrto4-007 retained_intron Mus_musculus 0 231
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 69

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