C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MRT4, mRNA turnover 4, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102503 Mrto4-001 ENSMUSG00000028741 10090 - 4:139347435-139352576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102503 6.584±1.66 7.850±2.17 15.608±1.53 12.410±1.51 4.837±1.36 4.399±1.03 4.692±0.30 5.351±0.84 16.641±14.98 4.125±0.79 14.702±0.96 8.568±5.43 19.539±13.97 18.507±5.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WO CIL_0003WO_0002 CGP 4:139310744-139352576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005840 IEA ribosome
GO:0008150 ND biological_process
GO:0031965 IEA nuclear membrane
GO:0042254 IEA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330263 MRTO4-001 protein_coding Homo_sapiens 0 1005
ENST00000493700 MRTO4-002 processed_transcript Homo_sapiens 0 263
ENST00000515049 RP11-304F15.5-001 processed_pseudogene Homo_sapiens 0 691
ENST00000586758 RP11-807E13.3-001 processed_pseudogene Homo_sapiens 0 654

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