C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MX dynamin-like GTPase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330714 MX2-001 ENSG00000183486 9606 + 21:41361943-41408943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330714
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330714 6.995±0.00 6.169±0.00 0.717±0.00 3.500±0.33 1.580±1.44 1.841±0.62 0.399±0.00 0.619±0.32 3.134±0.29 0.391±0.00 3.258±0.98 4.274±1.00 1.649±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CV CIL_0001CV_0004 CGP 21:41361943-41459214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IMP:IEA GTP binding
GO:0005634 TAS nucleus
GO:0005643 IDA nuclear pore
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006184 IEA GTP catabolic process
GO:0006952 TAS defense response
GO:0009615 IDA response to virus
GO:0015031 IEA protein transport
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0035455 IDA response to interferon-alpha
GO:0046822 IMP regulation of nucleocytoplasmic transport
GO:0051028 IEA mRNA transport
GO:0051607 IMP defense response to virus
GO:0051726 IMP regulation of cell cycle
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024112 Mx2-201 protein_coding Mus_musculus 0 560
ENSMUST00000188251 Mx2-001 polymorphic_pseudogene Mus_musculus 0 560
ENSMUST00000190447 Mx2-002 polymorphic_pseudogene Mus_musculus 0 560
ENSMUST00000023655 Mx1-201 protein_coding Mus_musculus 0 468
ENSMUST00000155233 Mx1-003 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000113768 Mx1-001 protein_coding Mus_musculus 0 374
ENSMUST00000135184 Mx1-002 nonsense_mediated_decay Mus_musculus 0 243
ENSMUST00000142883 Mx1-004 protein_coding Mus_musculus 0 217

Loading