C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: snail family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332281 SNAI3-001 ENSG00000185669 9606 - 16:88677682-88686493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332281
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332281 0.467±0.00 1.513±0.00 0.775±0.00 0.202±0.04 1.343±1.16 0.614±0.04 0.503±0.28 1.123±0.65 3.835±1.00 0.706±0.12 0.496±0.23 1.078±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032X CIL_00032X_0001 CGP 16:88651935-88686493
CIL_000575 CIL_000575_0002 CGP 16:88677682-88706421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005507 IEA copper ion binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006762 Snai3-201 protein_coding Mus_musculus 0 588

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