C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H1 histone family, member X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333762 H1FX-001 ENSG00000184897 9606 - 3:129314771-129316277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333762 92.903±0.00 203.312±0.00 0.907±0.00 97.553±0.00 53.275±48.20 41.670±38.56 14.783±14.12 55.050±0.00 53.974±0.00 82.259±79.90 32.257±28.04 123.215±2.57 87.242±31.17 37.977±17.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000310 CIL_000310_0001 CGP 3:129278828-129316277

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005730 IDA nucleolus
GO:0006334 IEA nucleosome assembly
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056403 H1fx-001 protein_coding Mus_musculus 0 627
ENSMUST00000134600 Gm5577-003 processed_transcript Mus_musculus 0 195

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