C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: triggering receptor expressed on myeloid cells 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334475 TREM1-002 ENSG00000124731 9606 - 6:41275621-41286682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleTestisENST00000334475
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000334475 0.573±0.00 0.147±0.00 0.675±0.00 0.280±0.00 0.162±0.00 0.165±0.00 0.219±0.00 7.112±0.00 0.148±0.00 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0001 VISTA 6:41112821-41713777
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0006959 TAS humoral immune response
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0035556 TAS intracellular signal transduction
GO:0045087 TAS innate immune response
GO:0050900 TAS leukocyte migration
GO:0097110 IPI scaffold protein binding

Homologs

No Homologs available.

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