C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLX4 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334534 SLX4IP-002 ENSG00000149346 9606 + 20:10435303-10628034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334534 0.530±0.00 0.922±0.00 0.811±0.00 0.609±0.10 1.200±0.09 0.938±0.19 0.321±0.12 1.231±0.70 0.578±0.08 0.343±0.05 0.095±0.00 1.287±0.43 0.558±0.32 1.847±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000360 CIL_000360_0001 CGP 20:10401009-10636829
CIL_00043P CIL_00043P_0001 CGP 20:10435303-10674107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099311 Slx4ip-001 protein_coding Mus_musculus 0 1122
ENSMUST00000180277 Slx4ip-202 protein_coding Mus_musculus 0 1051
ENSMUST00000118433 Gm15366-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0001 55

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