C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N(alpha)-acetyltransferase 20, NatB catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334982 NAA20-001 ENSG00000173418 9606 + 20:20017116-20033629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334982 4.704±0.00 10.623±0.00 1.579±0.00 8.499±1.11 7.554±1.64 6.627±5.04 11.072±10.60 8.609±4.84 11.189±0.00 10.102±3.68 11.779±10.09 20.266±15.94 28.432±7.01 27.225±4.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586
CIL_0002MT CIL_0002MT_0001 CGP 20:19886521-20033655
CIL_0002MS CIL_0002MS_0001 CGP 20:20017116-20056046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004596 IEA peptide alpha-N-acetyltransferase activity
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008080 IEA N-acetyltransferase activity
GO:0008152 IEA metabolic process
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110000 Naa20-001 protein_coding Mus_musculus 0 1031
ENSMUST00000002805 Naa20-002 protein_coding Mus_musculus 0 747
ENSMUST00000060640 Gm7984-201 pseudogene Mus_musculus 0 712
ENSMUST00000149461 Naa20-009 nonsense_mediated_decay Mus_musculus 0 446
ENSMUST00000129502 Naa20-003 retained_intron Mus_musculus 0 355
ENSMUST00000150316 Naa20-005 protein_coding Mus_musculus 0 327
ENSMUST00000165635 Naa20-010 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000136330 Naa20-007 retained_intron Mus_musculus 0 257
ENSMUST00000169732 Naa20-008 protein_coding Mus_musculus 0 207
ENSMUST00000134759 Naa20-006 protein_coding Mus_musculus 3e-34 150

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