C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132669-ENSG00000173418 CGP 9606 20:19886521-20033655
GeneTranscriptPositionBiotype
ENSG00000132669 (RIN2)
Ras and Rab interactor 2 		ENST00000255006 (RIN2-003) 19886521-20002457 protein_coding
ENST00000440354 (RIN2-201) 19889566-20001348 protein_coding
ENST00000459721 (RIN2-002) 19889375-19956807 processed_transcript
ENST00000465815 (RIN2-004) 19889566-19895947 processed_transcript
ENST00000467569 (RIN2-005) 19889387-19970929 processed_transcript
ENST00000484638 (RIN2-001) 19935125-20002457 processed_transcript
ENST00000488077 (RIN2-006) 19889410-19935550 processed_transcript
ENSG00000173418 (NAA20)
N(alpha)-acetyltransferase 20, NatB catalytic subunit 		ENST00000310450 (NAA20-006) 20017310-20033629 protein_coding
ENST00000334982 (NAA20-001) 20017116-20033629 protein_coding
ENST00000398602 (NAA20-007) 20017390-20033655 protein_coding
ENST00000463154 (NAA20-002) 20017348-20033629 processed_transcript
ENST00000480550 (NAA20-005) 20017359-20033629 processed_transcript
ENST00000481837 (NAA20-004) 20017801-20022655 retained_intron
ENST00000484480 (NAA20-003) 20017310-20033629 processed_transcript
CIL_0002MT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001768-ENSMUSG00000002728 CGP 10090 2:145784734-145916425
GeneTranscriptPositionBiotype
ENSMUSG00000001768 (Rin2)
Ras and Rab interactor 2 		ENSMUST00000094480 (Rin2-201) 145786116-145887616 protein_coding
ENSMUST00000110005 (Rin2-002) 145785980-145887616 protein_coding
ENSMUST00000142847 (Rin2-003) 145784734-145822302 protein_coding
ENSMUST00000144278 (Rin2-007) 145822150-145844818 processed_transcript
ENSMUST00000145874 (Rin2-005) 145862644-145878974 processed_transcript
ENSMUST00000147976 (Rin2-001) 145786116-145887616 nonsense_mediated_decay
ENSMUST00000149269 (Rin2-006) 145822289-145845087 processed_transcript
ENSMUST00000150449 (Rin2-004) 145786162-145822704 nonsense_mediated_decay
ENSMUSG00000002728 (Naa20)
N(alpha)-acetyltransferase 20, NatB catalytic subunit 		ENSMUST00000002805 (Naa20-002) 145903241-145916425 protein_coding
ENSMUST00000110000 (Naa20-001) 145903241-145916425 protein_coding
ENSMUST00000129502 (Naa20-003) 145911900-145915734 retained_intron
ENSMUST00000134759 (Naa20-006) 145903294-145910404 protein_coding
ENSMUST00000136330 (Naa20-007) 145903297-145911998 retained_intron
ENSMUST00000149461 (Naa20-009) 145903262-145915631 nonsense_mediated_decay
ENSMUST00000150316 (Naa20-005) 145902099-145912528 protein_coding
ENSMUST00000165635 (Naa20-010) 145903253-145915551 nonsense_mediated_decay
ENSMUST00000169732 (Naa20-008) 145903257-145915557 protein_coding
ENSMUSG00000083014 (Gm11764)
predicted gene 11764 		ENSMUST00000120221 (Gm11764-001) 145892082-145892704 processed_pseudogene
ENSMUSG00000092758 (Gm25026)
predicted gene, 25026 		ENSMUST00000175017 (Gm25026-201) 145878286-145878473 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MT_0001ENSG00000132669ENST00000255006ENST00000440354ENST00000459721ENST00000465815ENST00000467569ENST00000484638ENST00000488077ENSG00000173418ENST00000310450ENST00000334982ENST00000398602ENST00000463154ENST00000480550ENST00000481837ENST00000484480CIL_0002MT_0002ENSMUSG00000001768ENSMUST00000094480ENSMUST00000110005ENSMUST00000142847ENSMUST00000144278ENSMUST00000145874ENSMUST00000147976ENSMUST00000149269ENSMUST00000150449ENSMUSG00000002728ENSMUST00000002805ENSMUST00000110000ENSMUST00000129502ENSMUST00000134759ENSMUST00000136330ENSMUST00000149461ENSMUST00000150316ENSMUST00000165635ENSMUST00000169732ENSMUSG00000083014ENSMUST00000120221ENSMUSG00000092758ENSMUST00000175017
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MT_0001ENSG00000132669ENST00000255006ENST00000440354ENST00000484638ENSG00000173418ENST00000310450ENST00000334982ENST00000398602ENST00000463154ENST00000480550ENST00000484480CIL_0002MT_0002ENSMUSG00000001768ENSMUST00000094480ENSMUST00000110005ENSMUST00000144278ENSMUSG00000002728ENSMUST00000002805ENSMUST00000110000ENSMUST00000134759ENSMUST00000149461ENSMUST00000150316ENSMUST00000165635ENSMUSG00000083014ENSMUST00000120221ENSMUSG00000092758ENSMUST00000175017
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132669 ENST00000255006 2.406±0.00 2.156±0.00 2.311±0.00 N/A 2.394±1.11 2.120±0.00 2.378±0.93 2.615±0.00 1.429±0.00 5.672±0.59 N/A 4.732±1.96 2.719±1.19 N/A
ENST00000440354 N/A N/A N/A N/A N/A N/A 4.005±0.00 N/A 1.025±0.00 13.925±0.00 2.174±1.26 N/A N/A N/A
ENST00000459721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484638 10.960±0.00 N/A N/A 4.352±2.87 7.558±0.00 3.960±0.00 2.677±0.00 8.572±0.00 N/A 11.901±0.00 2.423±0.00 3.805±0.82 3.441±1.74 2.588±2.09
ENST00000488077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173418 ENST00000310450 N/A N/A N/A N/A N/A 1.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000334982 4.704±0.00 10.623±0.00 1.579±0.00 8.499±1.11 7.554±1.64 6.627±5.04 11.072±10.60 8.609±4.84 11.189±0.00 10.102±3.68 11.779±10.09 20.266±15.94 28.432±7.01 27.225±4.06
ENST00000398602 N/A N/A 2.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.526±0.00 N/A N/A
ENST00000463154 10.040±0.00 N/A N/A 3.514±0.00 4.456±0.00 2.674±0.00 1.122±0.00 N/A 3.854±0.00 N/A 13.701±0.00 16.029±0.00 N/A N/A
ENST00000480550 7.186±0.00 15.192±0.00 N/A 15.845±0.00 10.185±0.00 4.234±2.24 0.628±0.00 17.667±10.69 6.253±1.95 N/A 8.376±2.68 6.303±2.39 5.715±0.00 26.241±10.17
ENST00000481837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484480 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001768 ENSMUST00000094480 5.132±1.93 2.110±0.94 2.544±0.15 1.825±0.30 8.372±2.48 7.243±2.20 2.046±1.13 3.239±0.75 0.622±0.20 14.362±1.35 0.323±0.00 4.830±2.01 0.648±0.13 1.307±0.37
ENSMUST00000110005 6.565±2.29 2.233±0.58 6.440±2.87 1.771±0.48 6.232±1.72 5.427±2.73 2.781±0.72 5.677±0.96 0.956±0.45 8.248±1.34 0.485±0.21 3.185±1.66 2.266±1.04 0.476±0.07
ENSMUST00000142847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.326±0.00
ENSMUST00000145874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000002728 ENSMUST00000002805 N/A N/A 5.193±0.43 5.069±0.00 N/A 4.411±0.01 N/A N/A 4.540±0.00 3.952±0.00 N/A 3.633±2.00 6.129±1.61 2.707±1.11
ENSMUST00000110000 18.739±2.22 6.042±3.03 17.037±12.51 21.045±12.07 9.878±3.19 17.076±2.30 18.501±1.92 21.816±1.86 16.257±11.89 14.067±3.38 16.256±5.49 9.840±4.84 23.504±9.85 12.747±5.96
ENSMUST00000129502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134759 N/A N/A N/A 2.503±0.00 1.291±0.00 N/A N/A N/A N/A N/A N/A 1.617±0.30 1.380±0.00 0.284±0.00
ENSMUST00000136330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149461 N/A 14.791±3.61 N/A N/A 10.232±0.00 10.408±2.62 N/A N/A 4.476±1.38 16.001±0.00 N/A 6.592±1.79 N/A N/A
ENSMUST00000150316 N/A 16.555±5.31 N/A N/A 11.785±0.00 N/A N/A N/A N/A N/A N/A N/A 41.800±0.00 7.914±0.00
ENSMUST00000165635 N/A N/A N/A 64.308±0.00 N/A 5.457±0.00 N/A N/A 2.309±0.00 N/A N/A 27.379±32.24 113.844±13.78 32.386±0.00
ENSMUST00000169732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083014 ENSMUST00000120221 N/A 0.419±0.14 0.062±0.04 0.057±0.00 0.223±0.06 N/A N/A N/A 0.058±0.05 0.144±0.00 N/A 0.250±0.04 0.066±0.04 0.258±0.17
ENSMUSG00000092758 ENSMUST00000175017 N/A N/A 0.550±0.00 N/A N/A N/A N/A N/A 0.605±0.00 N/A N/A 1.222±0.00 0.239±0.00 N/A

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