C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocator protein (18kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337554 TSPO-001 ENSG00000100300 9606 + 22:43151514-43163242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337554 39.099±0.00 47.041±0.00 0.532±0.00 4.236±3.08 52.199±50.66 17.174±14.30 40.745±0.00 20.541±19.28 10.919±7.72 45.783±42.67 19.916±0.00 45.730±26.32 73.603±25.13 14.118±10.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0008W4 CIL_0008W4_0001 VISTA 22:42938962-43540911
CIL_00046C CIL_00046C_0001 CGP 22:43132206-43163242
CIL_0004LQ CIL_0004LQ_0001 CGP 22:43151514-43187133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005741 NAS mitochondrial outer membrane
GO:0006626 TAS protein targeting to mitochondrion
GO:0006783 TAS heme biosynthetic process
GO:0006820 TAS anion transport
GO:0006869 IEA lipid transport
GO:0006915 TAS apoptotic process
GO:0007268 TAS synaptic transmission
GO:0008202 TAS steroid metabolic process
GO:0008283 TAS cell proliferation
GO:0008503 TAS benzodiazepine receptor activity
GO:0015485 TAS cholesterol binding
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane
GO:0032374 TAS regulation of cholesterol transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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