C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDNF-inducible zinc finger protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338121 GZF1-003 ENSG00000125812 9606 + 20:23362182-23373063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaENST00000338121
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta
ENST00000338121 0.796±0.00 1.403±0.00 0.869±0.00 1.164±0.43 1.626±0.00 2.621±0.00 0.604±0.00 2.571±0.87 1.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023L CIL_00023L_0001 CGP 20:23350736-23373063
CIL_0004MO CIL_0004MO_0002 CGP 20:23362182-23421519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028928 Gzf1-001 protein_coding Mus_musculus 0 1895
ENSMUST00000151362 Gzf1-003 processed_transcript Mus_musculus 0 706

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