C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IF
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338257 MYO1F-001 ENSG00000142347 9606 - 19:8520790-8577577 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DS CIL_0004DS_0002 CGP 19:8520790-8610735

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002446 IEA neutrophil mediated immunity
GO:0003774 IEA motor activity
GO:0003779 NAS actin binding
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA:NAS ATP binding
GO:0007162 IEA negative regulation of cell adhesion
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0016461 NAS unconventional myosin complex
GO:0030335 IEA positive regulation of cell migration
GO:0030864 IEA cortical actin cytoskeleton
GO:0031941 IEA filamentous actin
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0043312 IEA neutrophil degranulation
GO:0045088 IEA regulation of innate immune response
GO:0050830 IEA defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087605 Myo1f-001 protein_coding Mus_musculus 0 3618
ENSMUST00000173372 Myo1f-002 nonsense_mediated_decay Mus_musculus 0 3561
ENSMUST00000173426 Myo1f-003 retained_intron Mus_musculus 0 2237
ENSDART00000148304 myo1f-001 protein_coding Danio_rerio 0 1146
ENSDART00000113183 myo1f-201 protein_coding Danio_rerio 0 1123

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