C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC-type containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339420 ZDHHC3-003 ENSG00000163812 9606 - 3:44915257-44945196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339420
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339420 3.198±0.00 2.363±1.29 6.239±0.00 5.586±0.00 1.598±0.78 6.720±0.00 2.418±0.00 3.982±1.85 6.048±1.22 18.888±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000130 CIL_000130_0001 CGP 3:44874608-44976185
CIL_00073X CIL_00073X_0001 CGP 3:44915257-45036066

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140497 Zdhhc3-001 nonsense_mediated_decay Mus_musculus 0 664
ENSMUST00000138622 Zdhhc3-004 nonsense_mediated_decay Mus_musculus 0 531
ENSMUST00000147563 Zdhhc3-003 protein_coding Mus_musculus 0 531
ENSMUST00000129862 Zdhhc3-010 nonsense_mediated_decay Mus_musculus 0 531
ENSMUST00000026892 Zdhhc3-008 nonsense_mediated_decay Mus_musculus 0 531
ENSMUST00000155778 Zdhhc3-005 nonsense_mediated_decay Mus_musculus 0 488
ENSMUST00000152396 Zdhhc3-009 nonsense_mediated_decay Mus_musculus 0 472
ENSDART00000017017 zdhhc3a-001 protein_coding Danio_rerio 0 292
ENSMUST00000129151 Zdhhc3-002 retained_intron Mus_musculus 7.00649e-44 183

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