C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin L
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340342 CTSL-002 ENSG00000135047 9606 + 9:87726109-87731386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340342
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340342 44.300±0.00 49.423±0.00 4.589±0.00 18.126±9.69 18.546±10.55 19.540±16.59 14.577±9.83 74.269±48.46 47.728±40.86 35.437±27.74 7.485±0.00 72.452±44.61 535.247±157.49 73.001±31.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IPI fibronectin binding
GO:0002224 TAS toll-like receptor signaling pathway
GO:0002250 IEP adaptive immune response
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005518 IDA collagen binding
GO:0005576 NAS extracellular region
GO:0005615 IDA extracellular space
GO:0005634 TAS nucleus
GO:0005764 IDA lysosome
GO:0006508 IDA:IEA proteolysis
GO:0008234 IDA:IEA cysteine-type peptidase activity
GO:0019882 TAS antigen processing and presentation
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0030574 IDA collagen catabolic process
GO:0036021 TAS endolysosome lumen
GO:0042393 IDA histone binding
GO:0043202 TAS lysosomal lumen
GO:0043394 IPI proteoglycan binding
GO:0045087 TAS innate immune response
GO:0051603 IDA proteolysis involved in cellular protein catabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0071888 NAS macrophage apoptotic process
GO:0097067 IEP cellular response to thyroid hormone stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071526 Ctsj-201 protein_coding Mus_musculus 0 193

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