C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1-associated ATM activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340611 BRAT1-001 ENSG00000106009 9606 - 7:2537877-2555727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340611 6.386±0.00 9.037±0.00 0.285±0.00 2.015±1.23 18.407±0.00 2.928±2.75 2.641±2.38 7.033±0.00 5.874±0.00 1.787±0.00 5.902±0.00 10.590±7.28 9.996±4.14 23.498±4.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0010212 IMP response to ionizing radiation
GO:0016020 IDA membrane

Homologs

No Homologs available.

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