C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostate transmembrane protein, androgen induced 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341744 PMEPA1-001 ENSG00000124225 9606 - 20:57648392-57709902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341744 5.700±0.00 10.121±0.00 0.338±0.00 3.945±2.99 37.030±34.88 4.973±3.54 5.558±0.00 5.403±0.00 0.988±0.00 10.858±0.00 0.452±0.00 8.666±5.31 1.226±0.63 3.384±2.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0001 VISTA 20:57109440-57710361
CIL_0008BA CIL_0008BA_0001 VISTA 20:57139654-57744237
CIL_0005K6 CIL_0005K6_0001 CGP 20:57603846-57711536
CIL_00073T CIL_00073T_0001 CGP 20:57648392-58161150

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0010008 IDA endosome membrane
GO:0010991 IDA negative regulation of SMAD protein complex assembly
GO:0016021 NAS integral component of membrane
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030521 NAS androgen receptor signaling pathway
GO:0031901 IDA early endosome membrane
GO:0050699 IPI WW domain binding
GO:0060394 IMP negative regulation of pathway-restricted SMAD protein phosphorylation
GO:0070412 IPI R-SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036248 Pmepa1-001 protein_coding Mus_musculus 0 1452
ENSMUST00000139306 Pmepa1-002 protein_coding Mus_musculus 0 521
ENSMUST00000124124 Pmepa1-003 retained_intron Mus_musculus 0 318

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