C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341840 ZKSCAN7-002 ENSG00000196345 9606 + 3:44555203-44583483 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041R CIL_00041R_0002 CGP 3:44498970-44583483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 1e-38 165
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 1e-38 165
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 3e-35 154
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 1e-33 148
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 1e-33 148
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 1e-33 148
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 1e-33 148
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 2e-31 141
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 4e-19 100
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 4e-19 100
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 4e-19 100

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