C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cordon-bleu WH2 repeat protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342193 COBLL1-004 ENSG00000082438 9606 - 2:164684765-164841412 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungPlacentaTestisENST00000342193
Transcript ID Adrenal Brain Breast Colon Kidney Lung Placenta Testis
ENST00000342193 1.582±0.00 0.545±0.18 3.128±0.00 0.968±0.00 5.140±0.00 2.428±0.00 5.422±2.24 0.951±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S1 CIL_0003S1_0002 CGP 2:164492812-164843679
CIL_0006CM CIL_0006CM_0001 CGP 2:164653624-164955525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102726 Cobll1-002 protein_coding Mus_musculus 0 1661
ENSMUST00000112429 Cobll1-201 protein_coding Mus_musculus 0 1646
ENSMUST00000112431 Cobll1-001 protein_coding Mus_musculus 0 1646
ENSMUST00000112430 Cobll1-004 protein_coding Mus_musculus 0 989
ENSMUST00000090896 Cobll1-003 protein_coding Mus_musculus 0 989
ENSMUST00000155916 Cobll1-008 protein_coding Mus_musculus 0 640
ENSMUST00000156643 Cobll1-007 protein_coding Mus_musculus 0 418
ENSMUST00000132478 Cobll1-009 processed_transcript Mus_musculus 0 366
ENSMUST00000155082 Cobll1-011 protein_coding Mus_musculus 0 329

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