C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin (CD79A) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342206 IGBP1-001 ENSG00000089289 9606 + X:70133449-70166324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000342206
Transcript ID Lung
ENST00000342206 2.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RE CIL_0002RE_0001 CGP X:70062491-70166324
CIL_0002RD CIL_0002RD_0001 CGP X:70133449-70205545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005737 NAS cytoplasm
GO:0005874 IEA microtubule
GO:0007165 NAS signal transduction
GO:0008601 IDA protein phosphatase type 2A regulator activity
GO:0009966 IEA regulation of signal transduction
GO:0019904 IEA protein domain specific binding
GO:0031434 IEA mitogen-activated protein kinase kinase binding
GO:0032873 IMP negative regulation of stress-activated MAPK cascade
GO:0034612 IMP response to tumor necrosis factor
GO:0035306 IEA positive regulation of dephosphorylation
GO:0035308 IEA negative regulation of protein dephosphorylation
GO:0042113 IEA B cell activation
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0060632 IMP regulation of microtubule-based movement
GO:0070555 IMP response to interleukin-1
GO:2001234 IEA negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033570 Igbp1-001 protein_coding Mus_musculus 0 1164
ENSMUST00000144881 Igbp1-003 retained_intron Mus_musculus 0 542

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