C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, alpha 4, 37kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342280 GJA4-001 ENSG00000187513 9606 + 1:34792998-34795747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342280 34.410±0.00 28.444±0.00 0.920±0.00 2.212±0.00 10.305±9.45 13.209±0.00 5.960±5.39 8.069±5.83 10.677±0.00 18.901±18.56 6.164±3.83 6.953±4.83 47.750±32.91 5.667±5.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JO CIL_0004JO_0002 CGP 1:34792998-34929585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IEA blood vessel development
GO:0003158 IEA endothelium development
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0005921 TAS gap junction
GO:0005922 IEA connexon complex
GO:0006810 TAS transport
GO:0006816 IEA calcium ion transport
GO:0007043 TAS cell-cell junction assembly
GO:0007267 IEA cell-cell signaling
GO:0016021 IEA integral component of membrane
GO:0048265 IEA response to pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053753 Gja4-001 protein_coding Mus_musculus 0 1216
ENSMUST00000062944 Gja8-201 protein_coding Mus_musculus 3e-35 154

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