C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, alpha 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062944 Gja8-201 ENSMUSG00000049908 10090 - 3:96918863-96926020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062944
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062944 0.149±0.05 0.070±0.00 0.022±0.01 0.020±0.00 0.061±0.00 0.034±0.00 0.038±0.00 0.061±0.04 0.018±0.02 0.022±0.00 0.025±0.01 0.085±0.07 0.041±0.03 0.816±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D1 CIL_0004D1_0002 CGP 3:96918863-97053634

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002088 IMP lens development in camera-type eye
GO:0005243 IEA gap junction channel activity
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane
GO:0007267 IEA cell-cell signaling
GO:0016021 IEA integral component of membrane
GO:0043010 IMP camera-type eye development
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342280 GJA4-001 protein_coding Homo_sapiens 3e-35 154
ENST00000369235 GJA8-001 protein_coding Homo_sapiens 0 1304
ENST00000430508 GJA5-002 protein_coding Homo_sapiens 0 195
ENST00000450137 GJA4-002 protein_coding Homo_sapiens 2e-35 154
ENST00000579774 GJA5-001 protein_coding Homo_sapiens 0 195
ENST00000621517 GJA5-201 protein_coding Homo_sapiens 0 195

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