C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipid scramblase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342435 PLSCR1-001 ENSG00000188313 9606 - 3:146515180-146544864 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342435
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342435 6.033±0.00 12.659±0.00 1.238±0.00 1.087±0.00 5.093±0.00 6.267±1.89 2.334±0.00 13.742±0.00 2.167±0.26 8.367±2.84 0.548±0.00 5.930±4.17 4.010±0.00 2.613±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0004 CGP 3:146391421-146544864
CIL_00065H CIL_00065H_0005 CGP 3:146515180-146606216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0005154 IPI epidermal growth factor receptor binding
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006659 ISS phosphatidylserine biosynthetic process
GO:0006915 IDA apoptotic process
GO:0006953 ISS acute-phase response
GO:0010628 IMP positive regulation of gene expression
GO:0016020 IDA membrane
GO:0017121 IDA phospholipid scrambling
GO:0017124 IDA SH3 domain binding
GO:0017128 IDA phospholipid scramblase activity
GO:0019899 IPI enzyme binding
GO:0030168 NAS platelet activation
GO:0031012 IDA extracellular matrix
GO:0033003 ISS regulation of mast cell activation
GO:0035456 IMP response to interferon-beta
GO:0042609 IPI CD4 receptor binding
GO:0045071 IMP negative regulation of viral genome replication
GO:0045089 IMP positive regulation of innate immune response
GO:0045121 IDA membrane raft
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051607 IMP defense response to virus
GO:0060368 ISS regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 IDA extracellular vesicular exosome
GO:2000373 IDA positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity

Homologs

No Homologs available.

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