C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342907 ST3GAL2-201 ENSG00000157350 9606 - 16:70379435-70439088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342907
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342907 5.974±0.00 7.299±0.00 0.375±0.00 1.467±0.77 3.350±1.84 3.910±0.00 2.425±1.91 2.405±1.80 3.236±1.17 4.284±3.37 2.267±0.22 8.170±6.94 6.346±2.27 3.115±1.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003836 IEA beta-galactoside (CMP) alpha-2,3-sialyltransferase activity
GO:0005576 IEA extracellular region
GO:0005975 TAS carbohydrate metabolic process
GO:0006040 TAS amino sugar metabolic process
GO:0006464 TAS cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0008373 IEA sialyltransferase activity
GO:0016266 TAS O-glycan processing
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034197 St3gal2-001 protein_coding Mus_musculus 0 1602
ENSMUST00000117534 St3gal2-002 protein_coding Mus_musculus 0 1336
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.000006 58

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