C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156289 Rgs20-006 ENSMUSG00000002459 10090 - 1:4922528-5019379 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLungENSMUST00000156289
Transcript ID Adipose Breast Lung
ENSMUST00000156289 0.039±0.00 0.081±0.04 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053U CIL_00053U_0002 CGP 1:4909576-5162549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124666 rgs20-201 protein_coding Danio_rerio 0.000000001 69
ENSDART00000147355 rgs20-003 protein_coding Danio_rerio 0.000000001 69
ENSDART00000131230 rgs20-002 protein_coding Danio_rerio 0.000000001 69
ENSDART00000056735 rgs20-001 protein_coding Danio_rerio 0.000000004 68
ENST00000261015 WDR12-001 protein_coding Homo_sapiens 0.0005 53
ENST00000265164 CASP6-001 protein_coding Homo_sapiens 0.000002 58
ENST00000269601 TXNL4A-001 protein_coding Homo_sapiens 0.000005 58
ENST00000271375 SFT2D2-001 protein_coding Homo_sapiens 0.00002 58
ENST00000300107 CLPX-001 protein_coding Homo_sapiens 0.000007 58
ENST00000304177 C15orf40-001 protein_coding Homo_sapiens 0.00002 58
ENST00000304501 SOX7-001 protein_coding Homo_sapiens 0.000005 58
ENST00000310447 CASP2-001 protein_coding Homo_sapiens 0.00002 57
ENST00000311437 ZNF490-001 protein_coding Homo_sapiens 0.0003 53
ENST00000324288 CIITA-001 protein_coding Homo_sapiens 0.000005 60
ENST00000339844 ZNF28-006 protein_coding Homo_sapiens 0.000003 57
ENST00000342907 ST3GAL2-201 protein_coding Homo_sapiens 0.000006 58
ENST00000352981 CASP6-002 protein_coding Homo_sapiens 0.000002 58
ENST00000358186 BDH1-201 protein_coding Homo_sapiens 0.00006 55
ENST00000372204 DYDC1-001 protein_coding Homo_sapiens 0.000001 58
ENST00000378244 DEPDC4-006 nonsense_mediated_decay Homo_sapiens 0.00001 57
ENST00000380285 SNX1-005 nonsense_mediated_decay Homo_sapiens 0.00001 58
ENST00000392378 BDH1-001 protein_coding Homo_sapiens 0.00006 55
ENST00000392379 BDH1-202 protein_coding Homo_sapiens 0.00006 55
ENST00000392845 SLC33A1-002 protein_coding Homo_sapiens 0.00005 57
ENST00000393640 ST3GAL2-001 protein_coding Homo_sapiens 0.00001 58
ENST00000412331 EIF3L-001 protein_coding Homo_sapiens 0.0002 53
ENST00000417099 RP1-283E3.4-002 processed_transcript Homo_sapiens 0.000009 57
ENST00000428830 CHEK1-002 protein_coding Homo_sapiens 0.000003 58
ENST00000438150 ZNF28-004 protein_coding Homo_sapiens 0.00003 57
ENST00000453477 DYDC1-004 protein_coding Homo_sapiens 0.000001 58
ENST00000460168 HERC4-004 retained_intron Homo_sapiens 0.000003 58
ENST00000469270 PPP2R3A-005 processed_transcript Homo_sapiens 0.000001 58
ENST00000472067 CASP2-004 retained_intron Homo_sapiens 0.00003 57
ENST00000480615 SNRNP200-003 retained_intron Homo_sapiens 0.000002 58
ENST00000493091 PILRB-009 retained_intron Homo_sapiens 0.00002 57
ENST00000493328 ZMYM6-004 processed_transcript Homo_sapiens 0.0001 55
ENST00000495184 DOCK8-006 retained_intron Homo_sapiens 0.00001 58
ENST00000498122 CHEK1-016 nonsense_mediated_decay Homo_sapiens 0.000001 58
ENST00000507550 CASP6-009 retained_intron Homo_sapiens 0.000001 58
ENST00000514271 CLIP1-011 retained_intron Homo_sapiens 0.000005 58
ENST00000529167 C11orf88-002 protein_coding Homo_sapiens 0.000004 58
ENST00000547455 CERS5-011 nonsense_mediated_decay Homo_sapiens 0.0000008 58
ENST00000550404 ANKRD13A-002 processed_transcript Homo_sapiens 0.00001 57
ENST00000557879 EMC4-011 protein_coding Homo_sapiens 0.00006 53
ENST00000557958 LDLR-009 retained_intron Homo_sapiens 0.000003 58
ENST00000565616 ATF7IP2-016 retained_intron Homo_sapiens 0.0000008 58
ENST00000582596 C1orf186-006 processed_transcript Homo_sapiens 0.000002 58
ENST00000587098 CCDC130-005 retained_intron Homo_sapiens 0.00004 53
ENST00000593682 CTD-2192J16.20-001 nonsense_mediated_decay Homo_sapiens 0.0004 53
ENST00000594602 ZNF28-009 protein_coding Homo_sapiens 0.000003 57
ENST00000596009 MRPS17P1-001 processed_pseudogene Homo_sapiens 0.00002 57
ENST00000596559 ZNF28-010 protein_coding Homo_sapiens 0.000003 57
ENST00000597553 IZUMO1-002 retained_intron Homo_sapiens 0.0000009 60
ENST00000612690 BDH1-203 protein_coding Homo_sapiens 0.00006 55
ENST00000617317 BDH1-204 protein_coding Homo_sapiens 0.00006 55
ENST00000619992 CASP2-201 protein_coding Homo_sapiens 0.00002 57
ENST00000620945 NUCB2-019 processed_transcript Homo_sapiens 0.000002 58

Loading