C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cathepsin L
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343150 CTSL-001 ENSG00000135047 9606 + 9:87725519-87731392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000343150
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000343150 2.174±0.00 2.900±0.00 2.907±0.00 4.499±3.60 3.515±2.45 6.164±0.00 3.420±0.00 6.342±4.30 1.122±0.14 9.430±5.30 50.624±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IPI fibronectin binding
GO:0002224 TAS toll-like receptor signaling pathway
GO:0002250 IEP adaptive immune response
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005518 IDA collagen binding
GO:0005576 NAS extracellular region
GO:0005615 IDA extracellular space
GO:0005634 TAS nucleus
GO:0005764 IDA lysosome
GO:0006508 IDA:IEA proteolysis
GO:0008234 IDA:IEA cysteine-type peptidase activity
GO:0019882 TAS antigen processing and presentation
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0030574 IDA collagen catabolic process
GO:0036021 TAS endolysosome lumen
GO:0042393 IDA histone binding
GO:0043202 TAS lysosomal lumen
GO:0043394 IPI proteoglycan binding
GO:0045087 TAS innate immune response
GO:0051603 IDA proteolysis involved in cellular protein catabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0071888 NAS macrophage apoptotic process
GO:0097067 IEP cellular response to thyroid hormone stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071526 Ctsj-201 protein_coding Mus_musculus 0 193

Loading