C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 198
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344458 TMEM198-002 ENSG00000188760 9606 + 2:219543663-219550579 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000344458
Transcript ID Brain
ENST00000344458 3.368±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_000414 CIL_000414_0002 CGP 2:219514170-219543787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016055 IEA Wnt signaling pathway
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050899 Tmem198-002 protein_coding Mus_musculus 0 1768
ENSMUST00000113575 Tmem198-001 protein_coding Mus_musculus 0 1768
ENSMUST00000148980 Tmem198-003 protein_coding Mus_musculus 0 285
ENSMUST00000187411 Tmem198-005 protein_coding Mus_musculus 2e-29 135

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