C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 8-oxoguanine DNA glycosylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344629 OGG1-002 ENSG00000114026 9606 + 3:9749944-9757513 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WL CIL_0002WL_0001 CGP 3:9731729-9788219
CIL_000243 CIL_000243_0001 CGP 3:9749944-9788219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003684 IEA damaged DNA binding
GO:0003824 IEA catalytic activity
GO:0004519 TAS endonuclease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006281 TAS:IEA DNA repair
GO:0006284 TAS:IEA base-excision repair
GO:0006285 TAS base-excision repair, AP site formation
GO:0006289 IEA nucleotide-excision repair
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0006979 IDA response to oxidative stress
GO:0008534 TAS:IEA oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0009314 IDA response to radiation
GO:0016363 IDA nuclear matrix
GO:0016607 IDA nuclear speck
GO:0033158 IDA regulation of protein import into nucleus, translocation
GO:0045007 TAS depurination
GO:0090305 TAS nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032406 Ogg1-001 protein_coding Mus_musculus 0 1055
ENSMUST00000136263 Ogg1-002 retained_intron Mus_musculus 0 713
ENSMUST00000147945 Ogg1-003 protein_coding Mus_musculus 0 335
ENSMUST00000156512 Camk1-004 retained_intron Mus_musculus 7e-32 143
ENSMUST00000153067 Camk1-006 retained_intron Mus_musculus 7e-32 143
ENSMUST00000032409 Camk1-001 protein_coding Mus_musculus 7e-32 143
ENSMUST00000149497 Camk1-005 retained_intron Mus_musculus 5e-28 130

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